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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930631.1_cds_XP_016477649.1_69362
CDS Infomation

[gene=LOC107799091] [db_xref=GeneID:107799091] [protein=sphingosine kinase 2-like isoform X3] [protein_id=XP_016477649.1] [location=join(122730..122754,124471..124557,124672..124749,124931..125001,125388..125657,125788..125910,126319..126516)] [gbkey=CDS]
Sequence

ATGCCTCTTGGAGTAATACCTGCAGGCACTGGAAACGGCATGGCGAAGTCTCTTCTAGAT
GCCGTTGGTCAATCTTGTAATGCATCTAATGCAACACTTGCTATTATTAGAGGGCACAAG
CAATTACTAGATGTAGCTACTGTTTCACAGGGGCAGAACAGGTTTTTCAGTGTGCTGATG
CTCGCCTGGGGTCTTATAGCTGATATTGATATCGAGTCTGAAAAGTATAGATGGATGGGT
AGTGCTCGAATAAATTATTATGCAATACAGCGAATATTCCGCCTTAGGAGGTACGATGGT
TGTATAAAATTTGTGGCTGCACCAGGTTATGAAACTTTTGGAGAACCAACTGACATGGAA
GTTGAAACTATTGATGATGTAAAATCGAATTTCGTTCAGCACAAGGGATATTGTGGTCCC
ACTTTTCACATGAAGGATTTCAACCGTAAGATCGAGGGGCCTTTTGTATCAATCTGGCTT
CATAATGTACCTTGGGGAGGTGAAGATGCTCTTGCAGCACCTGATGCCAAGTTTTCAGAT
GGTTACTTGGACTTGGTTGTGATAAAGGACTGCCCAAAACTAACATTGCTATCGTTGATG
ACCGAGTTAAACAAAGGCGGCCATGTCAGATCACCATATGTCTTGTATTTCAAGGTTAAA
GCTTTTGTTCTGGAGCCGGGTTCACGATTAGATGATCCATCCAAAGAAGGGATTATAGAT
GTAGACGGCGAGGTCCTTGCCAGAGGTAAAGGAACTTATAAATCAGATCAGAAGACATTG
ATGACATATAACAAGCTCCATATAAAAGTAGATCAAGGGTTGGCTACTGTATTTTCTCCT
ACAATTCCTTAA

Peptide Sequence

PEP ID

XP_016477649.1
PEP Infomation

PREDICTED: sphingosine kinase 2-like isoform X3 [Nicotiana tabacum]
Sequence

MPLGVIPAGTGNGMAKSLLDAVGQSCNASNATLAIIRGHKQLLDVATVSQGQNRFFSVLM
LAWGLIADIDIESEKYRWMGSARINYYAIQRIFRLRRYDGCIKFVAAPGYETFGEPTDME
VETIDDVKSNFVQHKGYCGPTFHMKDFNRKIEGPFVSIWLHNVPWGGEDALAAPDAKFSD
GYLDLVVIKDCPKLTLLSLMTELNKGGHVRSPYVLYFKVKAFVLEPGSRLDDPSKEGIID
VDGEVLARGKGTYKSDQKTLMTYNKLHIKVDQGLATVFSPTIP

Transcript Sequence

Gene sequence data has not been registered.